Classes | |
| struct | DatasetGroupAndName |
| Class to store a pair (hdf_group, dataset_name). More... | |
| struct | DatasetInfo |
| Class to store offset information. More... | |
| struct | WritePartInfo |
| Offset information for the part to write associated with a rank. More... | |
| struct | ItemGroupCollectiveInfo |
| Collective information for an ItemGroup;. More... | |
| struct | DataInfo |
| Stores info about the data to be saved and the associated offset. More... | |
Public Member Functions | |
| VtkHdfV2DataWriter (IMesh *mesh, const ItemGroupCollection &groups, bool is_collective_io) | |
| void | beginWrite (const VariableCollection &vars) override |
| void | endWrite () override |
| void | setMetaData (const String &meta_data) override |
| Sets the metadata information. | |
| void | write (IVariable *var, IData *data) override |
| Writes the data data of the variable var. | |
| void | setTimes (RealConstArrayView times) |
| void | setDirectoryName (const String &dir_name) |
| void | setMaxWriteSize (Int64 v) |
| Public Member Functions inherited from Arcane::TraceAccessor | |
| TraceAccessor (ITraceMng *m) | |
| Constructs an accessor via the trace manager m. | |
| TraceAccessor (const TraceAccessor &rhs) | |
| Copy constructor. | |
| TraceAccessor & | operator= (const TraceAccessor &rhs) |
| Copy assignment operator. | |
| virtual | ~TraceAccessor () |
| Frees resources. | |
| ITraceMng * | traceMng () const |
| Trace manager. | |
| TraceMessage | info () const |
| Flow for an information message. | |
| TraceMessage | pinfo () const |
| Flow for a parallel information message. | |
| TraceMessage | info (char category) const |
| Flow for an information message of a given category. | |
| TraceMessage | pinfo (char category) const |
| Flow for a parallel information message of a given category. | |
| TraceMessage | info (bool v) const |
| Flow for an information message. | |
| TraceMessage | warning () const |
| Flow for a warning message. | |
| TraceMessage | pwarning () const |
| TraceMessage | error () const |
| Flow for an error message. | |
| TraceMessage | perror () const |
| TraceMessage | log () const |
| Flow for a log message. | |
| TraceMessage | plog () const |
| Flow for a log message. | |
| TraceMessage | logdate () const |
| Flow for a log message preceded by the date. | |
| TraceMessage | fatal () const |
| Flow for a fatal error message. | |
| TraceMessage | pfatal () const |
| Flow for a parallel fatal error message. | |
| TraceMessageDbg | debug (Trace::eDebugLevel=Trace::Medium) const |
| Flow for a debug message. | |
| Trace::eDebugLevel | configDbgLevel () const |
| Debug level of the configuration file. | |
| TraceMessage | info (Int32 verbose_level) const |
| Flow for an information message of a given level. | |
| TraceMessage | linfo () const |
| Flow for an information message with the local information level of this instance. | |
| TraceMessage | linfo (Int32 relative_level) const |
| Flow for an information message with the local information level of this instance. | |
| void | fatalMessage (const StandaloneTraceMessage &o) const |
| Public Member Functions inherited from Arcane::IDataWriter | |
| virtual | ~IDataWriter ()=default |
| Frees resources. | |
Private Member Functions | |
| void | _addInt64ArrayAttribute (Hid &hid, const char *name, Span< const Int64 > values) |
| void | _addStringAttribute (Hid &hid, const char *name, const String &value) |
| template<typename DataType> | |
| void | _writeDataSet1D (const DataInfo &data_info, GatherGroupInfo *gather_info, Span< const DataType > values) |
| template<typename DataType> | |
| void | _writeDataSet1DUsingCollectiveIO (const DataInfo &data_info, GatherGroupInfo *gather_info, Span< const DataType > values) |
| template<typename DataType> | |
| void | _writeDataSet1DCollective (const DataInfo &data_info, GatherGroupInfo *gather_info, Span< const DataType > values) |
| template<typename DataType> | |
| void | _writeDataSet2D (const DataInfo &data_info, GatherGroupInfo *gather_info, Span2< const DataType > values) |
| template<typename DataType> | |
| void | _writeDataSet2DUsingCollectiveIO (const DataInfo &data_info, GatherGroupInfo *gather_info, Span2< const DataType > values) |
| template<typename DataType> | |
| void | _writeDataSet2DCollective (const DataInfo &data_info, GatherGroupInfo *gather_info, Span2< const DataType > values) |
| template<typename DataType> | |
| void | _writeBasicTypeDataset (const DataInfo &data_info, GatherGroupInfo *gather_info, IData *data) |
| void | _writeReal3Dataset (const DataInfo &data_info, GatherGroupInfo *gather_info, IData *data) |
| void | _writeReal2Dataset (const DataInfo &data_info, GatherGroupInfo *gather_info, IData *data) |
| String | _getFileName () |
| template<typename DataType> | |
| void | _writeDataSetGeneric (const DataInfo &data_info, GatherGroupInfo *gather_info, Int32 nb_dim, Int64 dim1_size, Int64 dim2_size, const DataType *values_data, bool is_collective) |
| void | _writeDataSetGeneric (const DataInfo &data_info, GatherGroupInfo *gather_info, Int32 nb_dim, Int64 dim1_size, Int64 dim2_size, ConstMemoryView values_data, const hid_t hdf_datatype_type, bool is_collective) |
| Writes a 1D or 2D data. | |
| void | _addInt64Attribute (Hid &hid, const char *name, Int64 value) |
| Int64 | _readInt64Attribute (Hid &hid, const char *name) |
| void | _openOrCreateGroups () |
| void | _closeGroups () |
| void | _readAndSetOffset (DatasetInfo &offset_info, Int32 wanted_step) |
| void | _initializeOffsets () |
| void | _initializeItemGroupCollectiveInfos (ItemGroupCollectiveInfo &group_info, GatherGroupInfo &gather_info) |
| WritePartInfo | _computeWritePartInfo (Int64 local_size) |
| Computes the offset of our part and the total number of elements. | |
| void | _writeConstituentsGroups () |
Additional Inherited Members | |
| Protected Member Functions inherited from Arcane::TraceAccessor | |
| void | _setLocalVerboseLevel (Int32 v) |
| Int32 | _localVerboseLevel () const |
Definition at line 88 of file VtkHdfV2PostProcessor.cc.
| Arcane::VtkHdfV2DataWriter::VtkHdfV2DataWriter | ( | IMesh * | mesh, |
| const ItemGroupCollection & | groups, | ||
| bool | is_collective_io ) |
Definition at line 361 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 996 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1014 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1050 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1110 of file VtkHdfV2PostProcessor.cc.
|
private |
Computes the offset of our part and the total number of elements.
Definition at line 639 of file VtkHdfV2PostProcessor.cc.
References Arcane::IParallelMng::allGather(), Arcane::IParallelMng::commRank(), Arcane::IParallelMng::commSize(), and m_mesh.
Referenced by _writeDataSetGeneric().
|
inlineprivate |
Definition at line 334 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 670 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1267 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1094 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1250 of file VtkHdfV2PostProcessor.cc.
Definition at line 1033 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1195 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 605 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 900 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 918 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 909 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 948 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 966 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 957 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 887 of file VtkHdfV2PostProcessor.cc.
|
private |
Writes a 1D or 2D data.
For each time added, the data is written at the end of previous values unless rolling back, in which case the offset is in data_info.
Definition at line 705 of file VtkHdfV2PostProcessor.cc.
References _computeWritePartInfo(), ARCANE_CHECK_POINTER, ARCANE_THROW, Arcane::Hdf5Utils::HProperty::createDatasetTransfertCollectiveMPIIO(), Arcane::Hdf5Utils::HProperty::createDatasetTransfertIndependentMPIIO(), Arcane::ConstMemoryView::data(), Arcane::ConstMemoryView::datatypeSize(), Arcane::Hdf5Utils::HInit::hasParallelHdf5(), Arcane::TraceAccessor::info(), Arcane::String::localstr(), m_max_write_size, Arcane::math::min(), Arcane::GatherGroupInfo::nbWriterGlobal(), and Arcane::VtkHdfV2DataWriter::DatasetInfo::offset().
|
private |
Definition at line 1228 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 1206 of file VtkHdfV2PostProcessor.cc.
|
overridevirtual |
Implements Arcane::IDataWriter.
Definition at line 377 of file VtkHdfV2PostProcessor.cc.
|
overridevirtual |
Implements Arcane::IDataWriter.
Definition at line 1070 of file VtkHdfV2PostProcessor.cc.
|
inline |
Definition at line 245 of file VtkHdfV2PostProcessor.cc.
|
inline |
Definition at line 246 of file VtkHdfV2PostProcessor.cc.
|
overridevirtual |
Sets the metadata information.
Implements Arcane::IDataWriter.
Definition at line 1125 of file VtkHdfV2PostProcessor.cc.
|
inline |
Definition at line 244 of file VtkHdfV2PostProcessor.cc.
Writes the data data of the variable var.
Implements Arcane::IDataWriter.
Definition at line 1134 of file VtkHdfV2PostProcessor.cc.
References ARCANE_CHECK_POINTER, ARCANE_FATAL, Arcane::IVariable::dataType(), Arcane::IVariable::dimension(), Arcane::DT_Int32, Arcane::DT_Int64, Arcane::DT_Real, Arcane::DT_Real2, Arcane::DT_Real3, Arcane::IK_Cell, Arcane::IK_Node, Arcane::TraceAccessor::info(), Arcane::IVariable::isPartial(), Arcane::IVariable::itemKind(), Arcane::IVariable::name(), and Arcane::TraceAccessor::warning().
|
private |
Definition at line 300 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 296 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 301 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 297 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 272 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 277 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 286 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 288 of file VtkHdfV2PostProcessor.cc.
|
private |
Output directory.
Definition at line 266 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 278 of file VtkHdfV2PostProcessor.cc.
|
private |
HDF file identifier.
Definition at line 269 of file VtkHdfV2PostProcessor.cc.
|
private |
Current HDF filename.
Definition at line 263 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 302 of file VtkHdfV2PostProcessor.cc.
|
private |
List of groups to save.
Definition at line 257 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 281 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 282 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 280 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 283 of file VtkHdfV2PostProcessor.cc.
|
private |
Associated material manager (may be null).
Definition at line 254 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 298 of file VtkHdfV2PostProcessor.cc.
|
private |
Maximum size (in kilobytes) for a write operation.
If the write exceeds this size, it is split into multiple writes. This may be necessary with MPI-IO for large volumes.
Definition at line 310 of file VtkHdfV2PostProcessor.cc.
Referenced by _writeDataSetGeneric().
|
private |
Associated mesh.
Definition at line 251 of file VtkHdfV2PostProcessor.cc.
Referenced by _computeWritePartInfo().
|
private |
Definition at line 273 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 289 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 292 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 290 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 276 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 287 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 294 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 275 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 291 of file VtkHdfV2PostProcessor.cc.
|
private |
List of times.
Definition at line 260 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 271 of file VtkHdfV2PostProcessor.cc.
|
private |
Definition at line 284 of file VtkHdfV2PostProcessor.cc.