Arcane::IPrimaryMesh Class Reference

Inheritance diagram for Arcane::IPrimaryMesh:

Collaboration diagram for Arcane::IPrimaryMesh:

Public Member Functions
virtual VariableNodeReal3 &	nodesCoordinates ()=0
	Node coordinates.
virtual void	setDimension (Integer dim)=0
	Positions the mesh dimension (1D, 2D, or 3D).
virtual void	reloadMesh ()=0
	Reloads the mesh from protected variables.
virtual void	allocateCells (Integer nb_cell, Int64ConstArrayView cells_infos, bool one_alloc=true)=0
	Allocation of a mesh.
virtual void	endAllocate ()=0
	Indicates the end of cell allocation.
virtual void	deallocate ()=0
	Deallocates the mesh.
virtual IMeshInitialAllocator *	initialAllocator ()
	Specific initial allocator.
virtual VariableItemInt32 &	itemsNewOwner (eItemKind kind)=0
	Variable containing the identifier of the owning subdomain.
virtual void	exchangeItems ()=0
	Changes the owning subdomains of entities.
virtual void	setOwnersFromCells ()=0
	Positions entity owners based on the cell owner.
virtual void	setMeshPartInfo (const MeshPartInfo &mpi)=0
	Positions partitioning information.
Public Member Functions inherited from Arcane::IMesh
virtual void	build ()=0
virtual String	factoryName () const =0
	Name of the factory used to create the mesh.
virtual ItemInternalList	itemsInternal (eItemKind)=0
	Internal array of mesh elements of type type.
virtual SharedVariableNodeReal3	sharedNodesCoordinates ()=0
	Node coordinates.
virtual void	checkValidMesh ()=0
	Check for the validity of internal mesh structures (internal).
virtual void	checkValidMeshFull ()=0
	Mesh validity check.
virtual void	synchronizeGroupsAndVariables ()=0
	Synchronizes all mesh groups and variables.
virtual bool	isAllocated ()=0
	True if the mesh is allocated.
virtual Int64	timestamp ()=0
	Counter indicating the time of the last mesh modification.
	ARCANE_DEPRECATED_LONG_TERM ("Y2020: Do not use this method. Try to get 'ISubDomain' from another way") virtual ISubDomain *subDomain()=0
	Associated subdomain.
virtual IParallelMng *	parallelMng ()=0
	Parallelism manager.
virtual VariableScalarInteger	connectivity ()=0
	Connectivity descriptor.
virtual CellGroup	allActiveCells ()=0
virtual CellGroup	ownActiveCells ()=0
	Group of all active cells specific to the domain.
virtual CellGroup	allLevelCells (const Integer &level)=0
	Group of all cells of level level.
virtual CellGroup	ownLevelCells (const Integer &level)=0
	Group of all cells specific to the domain of level level.
virtual FaceGroup	allActiveFaces ()=0
	Group of all active faces.
virtual FaceGroup	ownActiveFaces ()=0
	Group of all active faces specific to the domain.
virtual FaceGroup	innerActiveFaces ()=0
	Group of all active faces.
virtual FaceGroup	outerActiveFaces ()=0
	Group of all active faces on the boundary.
virtual ItemGroupCollection	groups ()=0
	List of groups.
virtual ItemGroup	findGroup (const String &name)=0
	Returns the group with name name or a null group if none exists.
virtual void	destroyGroups ()=0
	Destroys all groups of all families.
virtual MeshItemInternalList *	meshItemInternalList ()=0
virtual void	updateGhostLayers (bool remove_old_ghost)=0
virtual ARCANE_DEPRECATED_240 void	serializeCells (ISerializer *buffer, Int32ConstArrayView cells_local_id)=0
virtual void	prepareForDump ()=0
	Prepares the instance for dumping.
virtual void	initializeVariables (const XmlNode &init_node)=0
	Initializes variables with values from the configuration file (internal).
virtual void	setCheckLevel (Integer level)=0
	Sets the mesh check level.
virtual Integer	checkLevel () const =0
	Current check level.
virtual bool	isDynamic () const =0
	Indicates if the mesh is dynamic (can evolve).
virtual bool	isAmrActivated () const =0
virtual void	computeTiedInterfaces (const XmlNode &mesh_node)=0
	Determines the semi-conforming interfaces.
virtual bool	hasTiedInterface ()=0
	True if semi-conforming interfaces exist in the mesh.
virtual TiedInterfaceCollection	tiedInterfaces ()=0
	List of semi-conforming interfaces.
virtual IMeshPartitionConstraintMng *	partitionConstraintMng ()=0
	Manager of partitioning constraints associated with this mesh.
virtual IMeshUtilities *	utilities ()=0
	Associated utility functions interface.
virtual Properties *	properties ()=0
	Properties associated with this mesh.
virtual IMeshModifier *	modifier ()=0
	Associated modifier interface.
virtual void	defineParentForBuild (IMesh *mesh, ItemGroup group)=0
	Defines the parent mesh and group.
virtual IMesh *	parentMesh () const =0
	Access to the parent mesh.
virtual ItemGroup	parentGroup () const =0
	Parent group.
virtual void	addChildMesh (IMesh *sub_mesh)=0
	Adds a sub-mesh to the parent mesh.
virtual MeshCollection	childMeshes () const =0
	List of sub-meshes of the current mesh.
virtual bool	isPrimaryMesh () const =0
	Indicates if the instance is a primary mesh.
virtual IPrimaryMesh *	toPrimaryMesh ()=0
	Returns the instance in the form of an IPrimaryMesh.
virtual IUserDataList *	userDataList ()=0
	Associated user data manager.
virtual const IUserDataList *	userDataList () const =0
	Associated user data manager.
virtual IGhostLayerMng *	ghostLayerMng () const =0
	Associated ghost layer manager.
virtual IMeshUniqueIdMng *	meshUniqueIdMng () const =0
	Unique ID numbering manager.
virtual IMeshChecker *	checker () const =0
	Checker interface.
virtual const MeshPartInfo &	meshPartInfo () const =0
	Mesh part information.
virtual bool	useMeshItemFamilyDependencies () const =0
	check if the network itemFamily dependencies is activated
virtual IItemFamilyNetwork *	itemFamilyNetwork ()=0
	Family network interface (connected families).
virtual IIndexedIncrementalItemConnectivityMng *	indexedConnectivityMng ()=0
	Interface of the indexed incremental connectivity manager.
virtual const MeshKind	meshKind () const =0
	Mesh characteristics.
virtual EventObservable< const MeshEventArgs & > &	eventObservable (eMeshEventType type)=0
	Observable for an event.
virtual IMeshCompactMng *	_compactMng ()=0
virtual InternalConnectivityPolicy	_connectivityPolicy () const =0
	Connectivity usage policy.
virtual IMeshMng *	meshMng () const =0
	Associated mesh manager.
virtual IVariableMng *	variableMng () const =0
	Associated variable manager.
virtual ItemTypeMng *	itemTypeMng () const =0
	Associated entity type manager.
virtual void	computeSynchronizeInfos ()=0
	Recalculates synchronization information.
virtual IMeshInternal *	_internalApi ()=0
	Internal Arcane API.
Public Member Functions inherited from Arcane::IMeshBase
virtual MeshHandle	handle () const =0
	Handle on this mesh.
virtual String	name () const =0
	Mesh name.
virtual Integer	nbNode ()=0
	Number of mesh nodes.
virtual Integer	nbEdge ()=0
	Number of mesh edges.
virtual Integer	nbFace ()=0
	Number of mesh faces.
virtual Integer	nbCell ()=0
	Number of mesh cells.
virtual Integer	nbItem (eItemKind ik)=0
	Number of elements of type ik.
virtual ITraceMng *	traceMng ()=0
	Associated message manager.
virtual Integer	dimension ()=0
	Mesh dimension (1D, 2D, or 3D).
virtual NodeGroup	allNodes ()=0
	Group of all nodes.
virtual EdgeGroup	allEdges ()=0
	Group of all edges.
virtual FaceGroup	allFaces ()=0
	Group of all faces.
virtual CellGroup	allCells ()=0
	Group of all cells.
virtual NodeGroup	ownNodes ()=0
	Group of all domain-specific nodes.
virtual EdgeGroup	ownEdges ()=0
	Group of all domain-specific edges.
virtual FaceGroup	ownFaces ()=0
	Group of all domain-specific faces.
virtual CellGroup	ownCells ()=0
	Group of all domain-specific cells.
virtual FaceGroup	outerFaces ()=0
	Group of all faces on the boundary.
virtual IItemFamily *	createItemFamily (eItemKind ik, const String &name)=0
	Create a particle family named name.
virtual IItemFamily *	findItemFamily (eItemKind ik, const String &name, bool create_if_needed=false, bool register_modifier_if_created=false)=0
	Returns the family named name.
virtual IItemFamily *	findItemFamily (const String &name, bool throw_exception=false)=0
	Returns the family named name.
virtual IItemFamilyModifier *	findItemFamilyModifier (eItemKind ik, const String &name)=0
	Returns the IItemFamilyModifier interface for the family named name and of type ik.
virtual IItemFamily *	itemFamily (eItemKind ik)=0
	Returns the entity family of type ik.
virtual IItemFamily *	nodeFamily ()=0
	Returns the node family.
virtual IItemFamily *	edgeFamily ()=0
	Returns the edge family.
virtual IItemFamily *	faceFamily ()=0
	Returns the face family.
virtual IItemFamily *	cellFamily ()=0
	Returns the cell family.
virtual IItemFamilyCollection	itemFamilies ()=0

Detailed Description

Interface of a primary mesh.

Primary mesh instances are created either when reading the dataset, or by programming, by calling one of the IMainFactory::createMesh() methods. Currently, it is not possible to delete a primary mesh.

For example, to create an empty 2D mesh named "Mesh2":

// sd is the current subdomain.
ISubDomain* sd = ...;
IParallelMng* pm = sd->parallelMng();
IMainFactory* mf = sd->application()->mainFactory();
IPrimaryMesh* new_mesh = mf->createMesh(sd,pm,"Mesh2");
new_mesh->setDimension(2);
new_mesh->allocateCells(0,Int64ConstArrayView(),false);
new_mesh->endAllocate();

The created mesh exists across all ranks of the IParallelMng passed as an argument. To create a mesh on a single processor, you can use IParallelMng::sequentialParallelMng().

It is also possible to read a mesh directly from a file using an implementation of IMeshReader. For example, to read a file in the historical Vtk format:

// sd is the current subdomain.
ISubDomain* sd = ...;
IParallelMng* pm = sd->parallelMng();
IMainFactory* mf = sd->application()->mainFactory();
IPrimaryMesh* new_mesh = mf->createMesh(sd,pm,"Mesh2");
 
IMeshReader* reader = ServiceBuilder<IMeshReader>::createInstance(sd,"VtkLegacyMeshReader");
reader->readMeshFromFile(new_mesh,XmlNode(),"sod.vtk","/tmp",false);
delete reader;

It is possible to modify the mesh later via the IMeshModifier interface, which can be retrieved by modifier(). Once modifications are made, you must call the endUpdate() method.

A mesh has certain properties, accessible via properties(). The following properties are valid:

• "sort", boolean, true by default. This property indicates that entities must be sorted after mesh modification so that they are arranged by increasing unique number. This is only useful to ensure that operations always happen in the same parallel order, regardless of the number of subdomains, and that the mesh evolves.
• "compact", boolean, true by default. This property indicates that entities must be compacted after mesh modification. This means there are no gaps in the numbering and that the local indices localId() of the entities will be numbered from 0 to the number of entities of this type. Compacting is a costly operation because it requires updating all variables to remove gaps in the numbering.
• "dump", boolean, true by default. This property indicates that the mesh must be saved during a checkpoint.
• "edges", boolean, false by default. This property indicates that edges must be created in a 3D mesh. NOTE: this property is not currently implemented.
• "sort-subitemitem-group", boolean, false by default. This property indicates whether groups (dynamically created) containing entities connected to a list of entities (e.g., allCells().nodes()) should be sorted. The sorting only applies to subsequent recalculations, and therefore, if you want all groups of this type to be created, you must set this property during mesh creation.

Definition at line 42 of file IPrimaryMesh.h.

Constructor & Destructor Documentation

~IPrimaryMesh()

virtual Arcane::IPrimaryMesh::~IPrimaryMesh ( )

inlinevirtual

Definition at line 47 of file IPrimaryMesh.h.

Member Function Documentation

allocateCells()

virtual void Arcane::IPrimaryMesh::allocateCells ( Integer nb_cell, Int64ConstArrayView cells_infos, bool one_alloc = true )

pure virtual

Allocation of a mesh.

Creation of an arbitrary mesh.

This method is the most generic of the mesh creation methods. It is used when you only know the cells and the list of their nodes based on their unique global number.

This operation allocates the structures for the mesh containing a number of cells equal to nb_cell, the cells being described by the array cells_infos.

Since the node numbers are unique numbers, their value can be arbitrary: it is not necessary to start at zero, nor must the numbers be consecutive. The implementation handles determining the number of nodes in the mesh.

For example, if we have two cells, the first of type IT_Hexaedron8, with unique number 23, and the second of type IT_Tetraedron4 with unique number 45, the array cells_infos will contain 16 elements, distributed as follows:

cells_infos[0] = IT_Hexaedron8
cells_infos[1] = 23
cells_infos[2...9] = The 8 nodes of the cell
cells_infos[10] = IT_Tetraedron4
cells_infos[11] = 45
cells_infos[12...15] = The 4 nodes of the cell

If nb_cell is zero and cells_infos is not empty, the number of cells is determined dynamically. The array cells_infos is iterated until the end of the array is reached or a cell of type IT_NullType is encountered.

If one_alloc is true, the endAllocate() operation is called to indicate that no other cells will be added. It is possible to allocate the mesh in several steps by setting one_alloc to false and calling endAllocate() at the end.

Warning

When calling this function, the current mesh and all groups are destroyed. This method should only be used to create the initial mesh. If you want to add or remove cells, you must use the IMeshModifier::addCells() or IMeshModifier::removeCells() methods.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

deallocate()

virtual void Arcane::IPrimaryMesh::deallocate ( )

pure virtual

Deallocates the mesh.

This deletes all entities and all entity groups. The mesh must then be reallocated via the call to allocateCells(). This call also deletes the mesh dimension, which must be reset by setDimension(). It is therefore possible to change the mesh dimension afterward.

This method is collective.

Warning

This method is experimental and many edge effects are possible. Notably, the current implementation does not support deallocation when there are partial variables on the mesh.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

endAllocate()

virtual void Arcane::IPrimaryMesh::endAllocate ( )

pure virtual

Indicates the end of cell allocation.

As long as this method has not been called, it is not valid to use this instance, except for allocating the mesh (allocateCells()).

This method is collective.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

exchangeItems()

virtual void Arcane::IPrimaryMesh::exchangeItems ( )

pure virtual

Changes the owning subdomains of entities.

This method is called when load balancing and redistributing the mesh between processors is desired. The method assumes that the IItemsFamily::itemsOwner() variables for each type of mesh entity (node, edge, face, and cell) contain the number of the new owning subdomain for each entity. These variables must be synchronized.

The instance then takes care of giving the cells that belong to it to other processors and receiving new cells from them, and then doing the same for nodes, edges, faces, and particles. The values of the variables and entity groups are also exchanged.

After calling this method, you may need to call the mesh change entry points (ITimeLoopMng::execMeshChangedEntryPoints).

To call this method, isDynamic() must be true.

Calling this method triggers an implicit call to endUpdate().

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

Referenced by Arcane::UnstructuredMeshUtilities::partitionAndExchangeMeshWithReplication().

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initialAllocator()

virtual IMeshInitialAllocator * Arcane::IPrimaryMesh::initialAllocator ( )

inlinevirtual

Specific initial allocator.

If null, allocateCells() must be used.

Reimplemented in Arcane::mesh::DynamicMesh.

Definition at line 105 of file IPrimaryMesh.h.

Referenced by Arcane::CartesianMeshAllocateBuildInfo::allocateMesh(), and Arcane::UnstructuredMeshAllocateBuildInfo::allocateMesh().

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itemsNewOwner()

virtual VariableItemInt32 & Arcane::IPrimaryMesh::itemsNewOwner ( eItemKind kind )

pure virtual

Variable containing the identifier of the owning subdomain.

Returns the variable containing the identifier of the owning subdomain of entities of the given kind.

Warning

This variable is used for generating synchronization messages between subdomains and must not be modified.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

nodesCoordinates()

virtual VariableNodeReal3 & Arcane::IPrimaryMesh::nodesCoordinates ( )

pure virtual

Node coordinates.

Implements Arcane::IMesh.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

reloadMesh()

virtual void Arcane::IPrimaryMesh::reloadMesh ( )

pure virtual

Reloads the mesh from protected variables.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

Referenced by Arcane::SubDomain::readOrReloadMeshes().

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setDimension()

virtual void Arcane::IPrimaryMesh::setDimension ( Integer dim )

pure virtual

Positions the mesh dimension (1D, 2D, or 3D).

The dimension corresponds to the dimension of the cell elements. If cells of multiple dimensions are present, the highest dimension must be indicated.

The dimension must be set before allocating cells if one uses allocateCells(), and must not be modified afterward.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

Referenced by Arcane::MshMeshReader::_readMeshFromNewMshFile().

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setMeshPartInfo()

virtual void Arcane::IPrimaryMesh::setMeshPartInfo ( const MeshPartInfo & mpi )

pure virtual

Positions partitioning information.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

setOwnersFromCells()

virtual void Arcane::IPrimaryMesh::setOwnersFromCells ( )

pure virtual

Positions entity owners based on the cell owner.

Positions the owners of entities other than cells (Node, Edge, and Face) based on the cell owner. This operation is only useful in parallel and must only be called during initialization after the endAllocate() method.

This operation is collective.

Implemented in Arcane::mesh::DynamicMesh, and Arcane::mesh::EmptyMesh.

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The documentation for this class was generated from the following files:

• IPrimaryMesh.h
• Mesh.dox